PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114165.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 371aa MW: 43479.6 Da PI: 7.0576

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.2	1.5e-24	19	107	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+++++ +ksk++g +t+r+fvC keg+re++k+ + +++r+etrt+ ka ++++ ++ +kw v+k++++HnH+l XP_028114165.1 19 EFYNEYGRIVGFSIKRDYCNKSKKDGVMTNRKFVCCKEGEREKDKRY-TMIKNPRSETRTNYKAFMHISFKRdLSKWIVSKFDSNHNHPL 107 6*****************************************999.99***************999799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MINHHILVWK FPSEEAAYEF YNEYGRIVGF SIKRDYCNKS KKDGVMTNRK FVCCKEGERE 60 KDKRYTMIKN PRSETRTNYK AFMHISFKRD LSKWIVSKFD SNHNHPLHLP QCTHLMPSQR 120 KVCDAQGINI DIADETGISL KASHDLISVI AGGKEFVGFT QEDQKTYLRA KRQRNLQYGE 180 AGSLLRYFQQ QVVENPYFYY AIQLDVDEMI TNIFWADHQM ITDYGLFGDA VSFDTTFRTN 240 KEYHPLALFS GFNHFRMTVI FGAALLYDET TELFEWLFEI FLYAMSGKKP VSFFTDPDQD 300 QAMAKAISQI MLEVFHGLCT FHLMQNALKH LGYLFKSGSK FRSDLKACIY DYENEHELIE 360 AWNSLIDKYN L

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MINHHILVWK FPSEEAAYEF YNEYGRIVGF SIKRDYCNKS KKDGVMTNRK FVCCKEGERE  60
KDKRYTMIKN PRSETRTNYK AFMHISFKRD LSKWIVSKFD SNHNHPLHLP QCTHLMPSQR  120
KVCDAQGINI DIADETGISL KASHDLISVI AGGKEFVGFT QEDQKTYLRA KRQRNLQYGE  180
AGSLLRYFQQ QVVENPYFYY AIQLDVDEMI TNIFWADHQM ITDYGLFGDA VSFDTTFRTN  240
KEYHPLALFS GFNHFRMTVI FGAALLYDET TELFEWLFEI FLYAMSGKKP VSFFTDPDQD  300
QAMAKAISQI MLEVFHGLCT FHLMQNALKH LGYLFKSGSK FRSDLKACIY DYENEHELIE  360
AWNSLIDKYN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-75	FAR1 family protein