PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114166.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 131aa    MW: 15166.1 Da    PI: 4.8899
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114166.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.81.6e-083669134
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfv 34
                    +fYneY++ vGFs+r+++ +ksk++g +t+r+f 
  XP_028114166.1 36 EFYNEYGRIVGFSIRRDYCNKSKEDGVMTSRKFG 69
                    6******************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MNDGGLEGGI EEMRELAKDK SPYLGMEFPS EEAVYEFYNE YGRIVGFSIR RDYCNKSKED  60
GVMTSRKFGI NIDIADETEI SLKASHDLIS AIAEGKEFVG FMRKDQKTYL RAKRQRNLQY  120
GEAESLLRYF Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.18e-09FAR1 family protein