PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114335.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 209aa    MW: 22958.5 Da    PI: 9.4463
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.91.4e-32112168158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rak+e+ +k+ +ksrkpylheSRh+hAlrR+Rg+gGrF
  XP_028114335.1 112 EEPVFVNAKQYHGILRRRQSRAKAESVNKV-TKSRKPYLHESRHQHALRRARGCGGRF 168
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MPSSVHDLSD DSEAEGQQKH SETQVQSSAP VTGMSYPGLT PPNVQYATPP QLGPGNTMGQ  60
AAYPYPDPYY RSIFAPYDTP PYPAQPFPAQ VTQPVFMGIQ QSGVPLPSDA VEEPVFVNAK  120
QYHGILRRRQ SRAKAESVNK VTKSRKPYLH ESRHQHALRR ARGCGGRFLN SKKAESQHQK  180
EAASGDKKSQ ANINLNCDKN DRAPSENAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.21e-64NF-YA family protein