PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114336.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 184aa    MW: 20501.1 Da    PI: 10.2021
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.31.1e-3287143158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rak+e+ +k+ +ksrkpylheSRh+hAlrR+Rg+gGrF
  XP_028114336.1  87 EEPVFVNAKQYHGILRRRQSRAKAESVNKV-TKSRKPYLHESRHQHALRRARGCGGRF 143
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MSYPGLTPPN VQYATPPQLG PGNTMGQAAY PYPDPYYRSI FAPYDTPPYP AQPFPAQVTQ  60
PVKLFQVHLQ FMGIQQSGVP LPSDAVEEPV FVNAKQYHGI LRRRQSRAKA ESVNKVTKSR  120
KPYLHESRHQ HALRRARGCG GRFLNSKKAE SQHQKEAASG DKKSQANINL NCDKNDRAPS  180
ENAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-62NF-YA family protein