PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114375.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 194aa    MW: 22363.5 Da    PI: 8.4654
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR190.72e-2841131191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                     +fYneY++ vGFs+r+++ +ks+++g +t+r+fvC keg+re++k+  +  +++r+etrt+Cka ++++ ++  +kw v+k++++HnH+l p
  XP_028114375.1  41 EFYNEYGRIVGFSIRRDYCNKSQKDGVMTSRKFVCCKEGEREKDKRY-TMIKNPRSETRTNCKAFMHISFKRdLSKWIVSKFDSNHNHPLHP 131
                     6*******************************************999.99*******************999799**************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEDSIMDNGG LEGCIEEMRE LAKDKSPYLG MEFPSEKAAY EFYNEYGRIV GFSIRRDYCN  60
KSQKDGVMTS RKFVCCKEGE REKDKRYTMI KNPRSETRTN CKAFMHISFK RDLSKWIVSK  120
FDSNHNHPLH PLQCTHLMPS QRKVCDAQGI NIDIADESGI SLKASYNLIS AIAGGKEFVG  180
FMQEDQKTYL RAKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-29FAR1 family protein