PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114395.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 543aa MW: 61251.4 Da PI: 6.5088

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.7	6.3e-09	480	535	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 r++WT+eE+e l+++v+++ + W++I + +Rt+ ++k++w+k XP_028114395.1 480 RLPWTAEEEEMLKEGVQKFSTMvnknlPWRKILEFGHhvfdGTRTPDDLKDKWRKI 535 89****************88*******9888999************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MRIKSIGGGK PRLFELPPKP SSTAFDYLAQ PSDFEACPDC SHDDTWGNEA NNDLQCNTVP 60 ETSIDHDHER RCRELALNTT GRTVFVMEKS CGLGPQGMWG LEDCLEMDWT EKEVCIKCDK 120 GGNLLICSDC NCPLAVHEEC MHCSAQFDSM GNFYCPYCSY KRATIETRKA RKKAMLAKKA 180 LSVFLDKGMT NGDPWKQKAE RVWRPNPSTV VGDKEHDDTR NRLDGDAVDN HSVQIEENQR 240 EERFDPGIRT SKYFCKGVEA SAANEQNDNV RPNDSGQHRI VIEQQIHPEP VIASGGGGDC 300 SSEEETDHQF EIVHVGKSAQ AEHAKLVDDR QNKRVAGSLS ASSLEKETKL DGALHISTEE 360 ELDNAGIVED KGRRREEEMQ EQEQGTTVSS SGGDSMQQEH AKISDLSCGE SGDVSPHWRR 420 IKKRNQNVVQ PPNVDRTRQS VRKLSSEAKT NVIHKEKKNA TSKSRQRTPN LGFPNVKRKR 480 LPWTAEEEEM LKEGVQKFST MVNKNLPWRK ILEFGHHVFD GTRTPDDLKD KWRKILVKEC 540 STK

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MRIKSIGGGK PRLFELPPKP SSTAFDYLAQ PSDFEACPDC SHDDTWGNEA NNDLQCNTVP  60
ETSIDHDHER RCRELALNTT GRTVFVMEKS CGLGPQGMWG LEDCLEMDWT EKEVCIKCDK  120
GGNLLICSDC NCPLAVHEEC MHCSAQFDSM GNFYCPYCSY KRATIETRKA RKKAMLAKKA  180
LSVFLDKGMT NGDPWKQKAE RVWRPNPSTV VGDKEHDDTR NRLDGDAVDN HSVQIEENQR  240
EERFDPGIRT SKYFCKGVEA SAANEQNDNV RPNDSGQHRI VIEQQIHPEP VIASGGGGDC  300
SSEEETDHQF EIVHVGKSAQ AEHAKLVDDR QNKRVAGSLS ASSLEKETKL DGALHISTEE  360
ELDNAGIVED KGRRREEEMQ EQEQGTTVSS SGGDSMQQEH AKISDLSCGE SGDVSPHWRR  420
IKKRNQNVVQ PPNVDRTRQS VRKLSSEAKT NVIHKEKKNA TSKSRQRTPN LGFPNVKRKR  480
LPWTAEEEEM LKEGVQKFST MVNKNLPWRK ILEFGHHVFD GTRTPDDLKD KWRKILVKEC  540
STK