PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114396.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 518aa MW: 58488.6 Da PI: 7.2022

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.8	5.9e-09	455	510	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 r++WT+eE+e l+++v+++ + W++I + +Rt+ ++k++w+k XP_028114396.1 455 RLPWTAEEEEMLKEGVQKFSTMvnknlPWRKILEFGHhvfdGTRTPDDLKDKWRKI 510 89****************88*******9888999************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MRIKSIGGGK PRLFELPPKP SSTAFDYLAQ CNTVPETSID HDHERRCREL ALNTTGRTVF 60 VMEKSCGLGP QGMWGLEDCL EMDWTEKEVC IKCDKGGNLL ICSDCNCPLA VHEECMHCSA 120 QFDSMGNFYC PYCSYKRATI ETRKARKKAM LAKKALSVFL DKGMTNGDPW KQKAERVWRP 180 NPSTVVGDKE HDDTRNRLDG DAVDNHSVQI EENQREERFD PGIRTSKYFC KGVEASAANE 240 QNDNVRPNDS GQHRIVIEQQ IHPEPVIASG GGGDCSSEEE TDHQFEIVHV GKSAQAEHAK 300 LVDDRQNKRV AGSLSASSLE KETKLDGALH ISTEEELDNA GIVEDKGRRR EEEMQEQEQG 360 TTVSSSGGDS MQQEHAKISD LSCGESGDVS PHWRRIKKRN QNVVQPPNVD RTRQSVRKLS 420 SEAKTNVIHK EKKNATSKSR QRTPNLGFPN VKRKRLPWTA EEEEMLKEGV QKFSTMVNKN 480 LPWRKILEFG HHVFDGTRTP DDLKDKWRKI LVKECSTK

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MRIKSIGGGK PRLFELPPKP SSTAFDYLAQ CNTVPETSID HDHERRCREL ALNTTGRTVF  60
VMEKSCGLGP QGMWGLEDCL EMDWTEKEVC IKCDKGGNLL ICSDCNCPLA VHEECMHCSA  120
QFDSMGNFYC PYCSYKRATI ETRKARKKAM LAKKALSVFL DKGMTNGDPW KQKAERVWRP  180
NPSTVVGDKE HDDTRNRLDG DAVDNHSVQI EENQREERFD PGIRTSKYFC KGVEASAANE  240
QNDNVRPNDS GQHRIVIEQQ IHPEPVIASG GGGDCSSEEE TDHQFEIVHV GKSAQAEHAK  300
LVDDRQNKRV AGSLSASSLE KETKLDGALH ISTEEELDNA GIVEDKGRRR EEEMQEQEQG  360
TTVSSSGGDS MQQEHAKISD LSCGESGDVS PHWRRIKKRN QNVVQPPNVD RTRQSVRKLS  420
SEAKTNVIHK EKKNATSKSR QRTPNLGFPN VKRKRLPWTA EEEEMLKEGV QKFSTMVNKN  480
LPWRKILEFG HHVFDGTRTP DDLKDKWRKI LVKECSTK