PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114411.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

YABBY

Protein Properties

Length: 169aa MW: 18489.9 Da PI: 9.0631

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	57.9	4.6e-18	11	56	2	47
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtslls 47 d++ ++++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l XP_028114411.1 11 DLVPPADNLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSF 56 678899************************************9854 PP
2	YABBY	101.1	2.4e-31	85	153	95	163
YABBY 95 svsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 + ss++ s+++++ +p++p v++PPek+ r Psaynrf+keeiqrik +nP+i hreafsaaaknWa + XP_028114411.1 85 QSSSSSSSTSSEQVSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKNANPEIPHREAFSAAAKNWARY 153 23333447899999*****************************************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MNSGGEKASM DLVPPADNLC YVRCNFCNTV LAVGIPCKRL LDTVTVKCGH CSNLSFLSTR 60 PPLQGQYFDH QTSLQGFGGE IKKGQSSSSS SSTSSEQVSP KAPFVVKPPE KKHRLPSAYN 120 RFMKEEIQRI KNANPEIPHR EAFSAAAKNW ARYIPNSPAG LMSEGTNNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	8e-67	YABBY family protein