PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114449.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 488aa MW: 54276.1 Da PI: 5.6822

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.3	1.4e-08	285	331	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + +r+ R+ +N+++ L +l+P++ K + a+++ A+eYIk+L XP_028114449.1 285 TKHCATDRQKREYMNDKYKALSSLVPNP-----SKSDRASVVGDAIEYIKEL 331 689999*******************9.....79*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MYEEIACFDP NTTMQEGLAE DGLSQNVPNY TPSFSMEDLS YHQNPPPEEP AGAAAAAAVE 60 VGLQQQMGSN MKHCYNNNNN NNNFIDTHLT QEVVHNSNQV LQYDQSNWDN NFNHEIQEMS 120 FHNPPHHHQS FNNSSSQTDD PYPPTPDLLN LFQLPRCSLP NSSLSFMTPT QKSANFQASL 180 GFLGHLPSAM DTASASSVIY DPLFHLNLPA QPPLFRELFQ SGPHVYNLEG SRTDSLFGGG 240 GADERRGSGG MYQDGERRHF DSGVLEFTGD MSCMASRGSN RKGTTKHCAT DRQKREYMND 300 KYKALSSLVP NPSKSDRASV VGDAIEYIKE LLRTVNELKI LVEKKRCGRE RSKRHKTEDG 360 SATGHGECSN ITPDPEQSYN GSTLRSSWLQ RKSKDTEVDI RIIDDEVTIK LGQRKKINCL 420 LIVSKVLDEL QLDIQHVSGG LVGDNYSYLF NSKICEGSSV YASAIANKLI EVMNRQDAAI 480 PPTSSYYG

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MYEEIACFDP NTTMQEGLAE DGLSQNVPNY TPSFSMEDLS YHQNPPPEEP AGAAAAAAVE  60
VGLQQQMGSN MKHCYNNNNN NNNFIDTHLT QEVVHNSNQV LQYDQSNWDN NFNHEIQEMS  120
FHNPPHHHQS FNNSSSQTDD PYPPTPDLLN LFQLPRCSLP NSSLSFMTPT QKSANFQASL  180
GFLGHLPSAM DTASASSVIY DPLFHLNLPA QPPLFRELFQ SGPHVYNLEG SRTDSLFGGG  240
GADERRGSGG MYQDGERRHF DSGVLEFTGD MSCMASRGSN RKGTTKHCAT DRQKREYMND  300
KYKALSSLVP NPSKSDRASV VGDAIEYIKE LLRTVNELKI LVEKKRCGRE RSKRHKTEDG  360
SATGHGECSN ITPDPEQSYN GSTLRSSWLQ RKSKDTEVDI RIIDDEVTIK LGQRKKINCL  420
LIVSKVLDEL QLDIQHVSGG LVGDNYSYLF NSKICEGSSV YASAIANKLI EVMNRQDAAI  480
PPTSSYYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31220.1	1e-80	bHLH family protein