PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114471.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 310aa    MW: 35360.2 Da    PI: 11.0054
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-09161208455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    +k    a++L + +++++sLq
  XP_028114471.1 161 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 208
                     8*************************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDPRAAERKL KKSESNRCNS PWFSYTRRKP TKLRRTIESI IAVSIALSHS PPTPPFSNEP  60
PGSQSSPQIN HWRRAQFPPI HVPTRTKSNK NRSIRIQTPI PLIQLFPTTI KNQQSEKSQR  120
RTREKGLGKR ASKSVANEAS DDGDKLPYVH VRARRGQATD SHSLAERARR EKINARMKLL  180
QELVPGCNKI SGTAMVLDEI INHVQSLQRQ VEFLSMRLAA VNPRIDFNLD SLLTAEIGAP  240
MDSNFLSMVM PHQWPEGQVN GNRQQYQQLW HFDGLHPPVW ERENNLNFVT PEISLMSSAS  300
QNSNQLKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.22e-68bHLH family protein