PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114571.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 259aa    MW: 30300.1 Da    PI: 9.5216
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR176.74.7e-24118207189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYn+YAk  GFs+r+++ +k k+n  +++r++vCskeg+r+++  + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH++
  XP_028114571.1 118 RFYNSYAKVKGFSIRRDQLYKDKNNM-VISRNWVCSKEGYRQSKYLEvKERKRQPKQLTRVGCRACFRIKYNRsTSKYEVNEFFKEHNHSM 207
                     5********************96666.9***************998877889999****************999***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDTLALLTWG PLLQISPERK IREGKKGFER KRRNSSRRKI GELRGVVGFK AQGPISYNNI  60
IYELDDDDDN DGEYNIHNED DIVNSNDIPT ERDIKRLDEL TEKDVFEMTF DLEENGERFY  120
NSYAKVKGFS IRRDQLYKDK NNMVISRNWV CSKEGYRQSK YLEVKERKRQ PKQLTRVGCR  180
ACFRIKYNRS TSKYEVNEFF KEHNHSMIGP LGVQFLRSHR NVTSANKAQG NAMHHIGMRT  240
GHIMDFAAQQ GGYENVGFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-22FAR1 family protein