PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114646.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 374aa MW: 43186.3 Da PI: 8.1292

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.7	1.8e-08	47	107	44	90
FAR1 44 ekkk..........tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 + + +ek+r ++a t +gCk +++++ + gk++vt+++ eHnHela XP_028114646.1 47 NAEGqrlpkyldrvAEKSRAPKALTIVGCKVQFRIRYNAdageGGKYVVTHFVAEHNHELA 107 33334444445576899999**************998777789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MNVEDGRADV KQEMVNDAHR NDMVSDVERA ILEQKFDSVE DGKAFYNAEG QRLPKYLDRV 60 AEKSRAPKAL TIVGCKVQFR IRYNADAGEG GKYVVTHFVA EHNHELAEQH CVMYLRSHRG 120 LNSADKGQAM AMHNVGVKTS QIMDYMVNQS GSYENVGSSV RICTTIIKPN VEQKLRMVMC 180 RTDSKSRADY VKFGDMLIFD STYRTNAYKK PFVMLAGVTN HFRTTIFACV LLANETFDTY 240 TWVLEIFMEA MGNKAPMSVL TDGDRGDCMD METNEAKFED GWARMGEKFG LQTNSWVLET 300 YEKRHMWAEA YMRGHFFAGM KSTQRSESMN AYFKPFLQHK LKLYEFVRHY DQALARISIT 360 RLEMIQKQIT LFRY

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MNVEDGRADV KQEMVNDAHR NDMVSDVERA ILEQKFDSVE DGKAFYNAEG QRLPKYLDRV  60
AEKSRAPKAL TIVGCKVQFR IRYNADAGEG GKYVVTHFVA EHNHELAEQH CVMYLRSHRG  120
LNSADKGQAM AMHNVGVKTS QIMDYMVNQS GSYENVGSSV RICTTIIKPN VEQKLRMVMC  180
RTDSKSRADY VKFGDMLIFD STYRTNAYKK PFVMLAGVTN HFRTTIFACV LLANETFDTY  240
TWVLEIFMEA MGNKAPMSVL TDGDRGDCMD METNEAKFED GWARMGEKFG LQTNSWVLET  300
YEKRHMWAEA YMRGHFFAGM KSTQRSESMN AYFKPFLQHK LKLYEFVRHY DQALARISIT  360
RLEMIQKQIT LFRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-43	FAR1 family protein