PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114700.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 389aa MW: 44707 Da PI: 8.1483

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142.3	2.8e-44	4	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 ++pGfrF Pt+eelv++yL++k++g++ +l++vi+ + iy+++PwdLp+ +++ + ++w+fF++r++k+a+g r+nr t+sgyWka g+ XP_028114700.1 4 MAPGFRFYPTEEELVSFYLQNKLQGRQ-DLDRVIPVLYIYHYNPWDLPQfageRCRRDPEQWFFFIPRQEKEARGGRPNRLTTSGYWKAIGSPGY 97 579********************99.66689***********646665556777******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s++++++g+kkt+vfy+grap+g+kt+W m+eyr+ XP_028114700.1 98 VYSSRNRVIGMKKTMVFYRGRAPTGRKTEWKMNEYRA 134 *********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MVDMAPGFRF YPTEEELVSF YLQNKLQGRQ DLDRVIPVLY IYHYNPWDLP QFAGERCRRD 60 PEQWFFFIPR QEKEARGGRP NRLTTSGYWK AIGSPGYVYS SRNRVIGMKK TMVFYRGRAP 120 TGRKTEWKMN EYRAIEREAS SSSAIPKLRP EFSLCRVYKK LKCLRAFDRR PSPEVPVTGQ 180 EAMVHQVIAH HGTEATTSHQ NRPTMERFWL RPEFSLCRVY KKSKCLRAFD RRPSPEVPVT 240 GQEAMVHQVI AHHGTEATTS HQNRPTMERT GSPESSDEDH PNPSKAVRSD NLDMDIGNEP 300 LWDWEHLNCW LDSENMLLLH WFLFLVVVFS VGISPTLDAV LADIEFILSG EHLVNIAVMN 360 EISMLTSSKA ETAALALPLT VIVATGYVS

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MVDMAPGFRF YPTEEELVSF YLQNKLQGRQ DLDRVIPVLY IYHYNPWDLP QFAGERCRRD  60
PEQWFFFIPR QEKEARGGRP NRLTTSGYWK AIGSPGYVYS SRNRVIGMKK TMVFYRGRAP  120
TGRKTEWKMN EYRAIEREAS SSSAIPKLRP EFSLCRVYKK LKCLRAFDRR PSPEVPVTGQ  180
EAMVHQVIAH HGTEATTSHQ NRPTMERFWL RPEFSLCRVY KKSKCLRAFD RRPSPEVPVT  240
GQEAMVHQVI AHHGTEATTS HQNRPTMERT GSPESSDEDH PNPSKAVRSD NLDMDIGNEP  300
LWDWEHLNCW LDSENMLLLH WFLFLVVVFS VGISPTLDAV LADIEFILSG EHLVNIAVMN  360
EISMLTSSKA ETAALALPLT VIVATGYVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-73	NAC family protein