PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114758.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 393aa MW: 43688.7 Da PI: 6.1932

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.9	2.1e-32	56	191	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkat 86 p+G++F+P+d e++ e+L++k+ + + ++e+i++vd i++++P++Lp vk + ++++fF+++ ++yatg+rk+r ++ + +W++t XP_028114758.1 56 PAGVKFDPSDVEIL-EHLAAKCGVGNskphMFIDEFIPTVDkeggICYTHPENLP-GVKIDGSSVHFFHRTINAYATGRRKRRRIQnqHIRWHKT 148 89*********9.999999876665565334445777766666******.6677889***************954422677 PP NAM 87 gkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 gk+k+v++ +g ++g+kk++v+y ++r +k+ k++Wvmh+y+l XP_028114758.1 149 GKTKPVME-NGVQKGCKKIMVLYktSKRGSKPDKSNWVMHQYHL 191 ****.999*******4435778888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MARNWLIDCK GIATKVKNAN LSPAFQIKDS GANRECPKCH YRIDNSDVSH EWPGFPAGVK 60 FDPSDVEILE HLAAKCGVGN SKPHMFIDEF IPTVDKEGGI CYTHPENLPG VKIDGSSVHF 120 FHRTINAYAT GRRKRRRIQN QHIRWHKTGK TKPVMENGVQ KGCKKIMVLY KTSKRGSKPD 180 KSNWVMHQYH LGTDEDEIEG QFVVSKIFSQ PQKQIDNSVK SHVVEDFDMG TIQTSPRTPK 240 TNTPNPPRPG KSFSCDDMID DYAPQSSAQQ EAEFATETSH PSSSTPHFKD ELETQTWLAG 300 ESQALDGNGV DDSLLCNEIF SSYSALSGLN HGPFSDVARF TNDVPVGDRN PSCGIADLEN 360 LDLGTPPDFQ LADLQFGSQE SILGWLDHLS SNE

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MARNWLIDCK GIATKVKNAN LSPAFQIKDS GANRECPKCH YRIDNSDVSH EWPGFPAGVK  60
FDPSDVEILE HLAAKCGVGN SKPHMFIDEF IPTVDKEGGI CYTHPENLPG VKIDGSSVHF  120
FHRTINAYAT GRRKRRRIQN QHIRWHKTGK TKPVMENGVQ KGCKKIMVLY KTSKRGSKPD  180
KSNWVMHQYH LGTDEDEIEG QFVVSKIFSQ PQKQIDNSVK SHVVEDFDMG TIQTSPRTPK  240
TNTPNPPRPG KSFSCDDMID DYAPQSSAQQ EAEFATETSH PSSSTPHFKD ELETQTWLAG  300
ESQALDGNGV DDSLLCNEIF SSYSALSGLN HGPFSDVARF TNDVPVGDRN PSCGIADLEN  360
LDLGTPPDFQ LADLQFGSQE SILGWLDHLS SNE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	139	GRRKRRRIQ
2	133	137	RKRRR
3	134	138	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	1e-100	NAC family protein