PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114858.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 340aa    MW: 37694.3 Da    PI: 5.2747
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114858.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-09185232455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    +k    a++L + + +++sLq
  XP_028114858.1 185 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIISHVQSLQ 232
                     8*************************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MERIASTELR SATCAVKSEE IGVETLQFGD EIEILMPPES GSSFTALLEL PANQAMELLH  60
SPAMLPGEIW CNHHQIEPYT ALLERASRNS VFATESSPET NSIPSNSSGN SHKAKQEPVD  120
SDSNPNSSDP MAQNNNPKST KRKEREKKGK GSMKKSKSVA NEASDDGDKL PYVHVRARRG  180
QATDSHSLAE RARREKINAR MKLLQELVPG CNKISGTAMV LDEIISHVQS LQRQVEFLSM  240
RLAAVNPRID FNLDNLLAAE NESPMDGNFP GTVMPLMWSE GQVNGNIQQY QQLWHFDGLH  300
QPVWGREDNA TFITPENSLL SYDLSTNSAC LPPNQLKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.23e-91bHLH family protein