PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114859.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 272aa    MW: 29844.5 Da    PI: 6.4052
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92e-09185232455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    +k    a++L + + +++sLq
  XP_028114859.1 185 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIISHVQSLQ 232
                     8*************************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MERIASTELR SATCAVKSEE IGVETLQFGD EIEILMPPES GSSFTALLEL PANQAMELLH  60
SPAMLPGEIW CNHHQIEPYT ALLERASRNS VFATESSPET NSIPSNSSGN SHKAKQEPVD  120
SDSNPNSSDP MAQNNNPKST KRKEREKKGK GSMKKSKSVA NEASDDGDKL PYVHVRARRG  180
QATDSHSLAE RARREKINAR MKLLQELVPG CNKISGTAMV LDEIISHVQS LQRQVEFLSM  240
RLAAVNPRID FNLDNLLAAE APMASTSQST FC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.15e-75bHLH family protein