PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114872.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GeBP

Protein Properties

Length: 367aa MW: 41212.9 Da PI: 4.6488

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	118.4	4e-37	109	206	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 lfqrlw++eDei lLqG+++++a++g s ++d++afy+++k++++++++k+qlveK+rrLKkK+++ +k+ sgke f+++hdq +fe+s+k XP_028114872.1 109 LFQRLWTDEDEIELLQGFLNYTAQRGGntSHHHDTTAFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKIGSGKEYIFKTPHDQATFEISRK 203 79*********************98545666********************************************************** PP DUF573 95 iWg 97 iW XP_028114872.1 204 IWS 206 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MASDQDRTTV YGGEDLDEDD DDDTEEDDLA LIPSQHHHLR DDVEEDDLDD DDDDDTSSSA 60 ALVTVALPST PLPLTVVADA NRLPIKHVTI AAVADERKPL PALDESRRLF QRLWTDEDEI 120 ELLQGFLNYT AQRGGNTSHH HDTTAFYDQI KSKLQLDFNK NQLVEKLRRL KKKYRNVLNK 180 IGSGKEYIFK TPHDQATFEI SRKIWSSIEE AGLEEDIANP NPNPNPISID HNGNGVDVNC 240 SEKKGSRPPR KRSRVKIDEK PQFDQQPHQI ATPIAASIPN SIEETVRSCL SPLFKELLHN 300 AMNGLCGSRG FGGVATALNP MPLSFGGGDM MDEKWRKQQI LELEVYSKRL ELVQDQIKSA 360 LGELRSI

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MASDQDRTTV YGGEDLDEDD DDDTEEDDLA LIPSQHHHLR DDVEEDDLDD DDDDDTSSSA  60
ALVTVALPST PLPLTVVADA NRLPIKHVTI AAVADERKPL PALDESRRLF QRLWTDEDEI  120
ELLQGFLNYT AQRGGNTSHH HDTTAFYDQI KSKLQLDFNK NQLVEKLRRL KKKYRNVLNK  180
IGSGKEYIFK TPHDQATFEI SRKIWSSIEE AGLEEDIANP NPNPNPISID HNGNGVDVNC  240
SEKKGSRPPR KRSRVKIDEK PQFDQQPHQI ATPIAASIPN SIEETVRSCL SPLFKELLHN  300
AMNGLCGSRG FGGVATALNP MPLSFGGGDM MDEKWRKQQI LELEVYSKRL ELVQDQIKSA  360
LGELRSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	4e-77	GeBP family protein