PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114913.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 418aa MW: 46780.1 Da PI: 10.3569

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114913.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	68.4	1.2e-21	83	135	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k+r+ Wt LH++Fv+av+ L G +kA+Pk+il++m+ + ++l+ v+ HLQkYR XP_028114913.1 83 KKRVSWTVVLHNKFVDAVRLL-GVDKAVPKEILQIMNEPVISLASVANHLQKYR 135 68*****************.****************************** PP
2	Myb_DNA-binding	26.3	1.7e-08	85	135	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT ++ ++vdav++lG + +k I + m+ +l ++ +++qky+ XP_028114913.1 85 RVSWTVVLHNKFVDAVRLLGVDkaVPKEILQIMNePVISLASVANHLQKYR 135 679******************************88999********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MRLNLKHKFG IAVMSTNDDK ESVMKGVKHG ARDYLIKPLR LEEVKNIWQH VVRQNLFNTT 60 KFGTVQEGTD QNPPIPSAQK KKKKRVSWTV VLHNKFVDAV RLLGVDKAVP KEILQIMNEP 120 VISLASVANH LQKYRNPLRK ENTKAKMTQE SENNINSNRT NGLLSDTITT ACINQGLNTL 180 NHHNRFAEQD MSTGIISFGS RLQTFGASTS NAKLLQQNQL PPKVVADQMR PTVLGSVPPS 240 QFFAANPSPH HELNGTRFHS INSGTEIFYD NFKMSSSQLP RFHTGQSGPS SMPVSFGPYS 300 CPPAAFNLAG VPFQMPNASD QLNPIFQPDS LAMLLPWPRE GRNLANLKVK EEPINFPFDM 360 RQITDDSIKK GQFGQHRYPF ENTEREIKSH HNNSSSSSDD GLLSSIVKQF SSNSAPRL

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MRLNLKHKFG IAVMSTNDDK ESVMKGVKHG ARDYLIKPLR LEEVKNIWQH VVRQNLFNTT  60
KFGTVQEGTD QNPPIPSAQK KKKKRVSWTV VLHNKFVDAV RLLGVDKAVP KEILQIMNEP  120
VISLASVANH LQKYRNPLRK ENTKAKMTQE SENNINSNRT NGLLSDTITT ACINQGLNTL  180
NHHNRFAEQD MSTGIISFGS RLQTFGASTS NAKLLQQNQL PPKVVADQMR PTVLGSVPPS  240
QFFAANPSPH HELNGTRFHS INSGTEIFYD NFKMSSSQLP RFHTGQSGPS SMPVSFGPYS  300
CPPAAFNLAG VPFQMPNASD QLNPIFQPDS LAMLLPWPRE GRNLANLKVK EEPINFPFDM  360
RQITDDSIKK GQFGQHRYPF ENTEREIKSH HNNSSSSSDD GLLSSIVKQF SSNSAPRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-30	ARR-B family protein