PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115193.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 439aa MW: 49392.9 Da PI: 8.1036

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.1	8.5e-13	5	55	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WTteE+e l +v+++G+g Wk I + R+ ++k++w++ XP_028115193.1 5 KQKWTTEEEEALRAGVAKHGTGKWKNILKDPDfalslSQRSNIDLKDKWRN 55 79*********************************89*********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MGNQKQKWTT EEEEALRAGV AKHGTGKWKN ILKDPDFALS LSQRSNIDLK DKWRNMGIST 60 AAHSSKEKIR IPRVKAITAG PLTNGQNSAS ASLIDDDKDG KTAPRWMHLD PCEGIYDNPL 120 LYEKGWKKNL NYVIAFAKDG VYDVTKRYSR KWHEVLSRRN ITTDPILSII LSNIRRECRQ 180 SFASQVISAL EDQDRNEAEA LERELHSKDD ASISLPGRQS GDKEWRMSRS EFGSDEICFP 240 SSSCCPARKC IDEHVTKIYN AFCPIISQFV EKSCSKSRAV EVLLFFKQML INLKNSPFRT 300 RRTSINPVSN GAQHLFLQML PSFDQLFDAL SLNSELDASG RVDIYLAADP VRTSIALPVL 360 FHALDDVIHN VNMCNNFNKN SLSWPLQKLN RIYSGLVLAS GEELSFGIVT SAFDGTRMSK 420 WEEPNGARGE GCLSHQEGT

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MGNQKQKWTT EEEEALRAGV AKHGTGKWKN ILKDPDFALS LSQRSNIDLK DKWRNMGIST  60
AAHSSKEKIR IPRVKAITAG PLTNGQNSAS ASLIDDDKDG KTAPRWMHLD PCEGIYDNPL  120
LYEKGWKKNL NYVIAFAKDG VYDVTKRYSR KWHEVLSRRN ITTDPILSII LSNIRRECRQ  180
SFASQVISAL EDQDRNEAEA LERELHSKDD ASISLPGRQS GDKEWRMSRS EFGSDEICFP  240
SSSCCPARKC IDEHVTKIYN AFCPIISQFV EKSCSKSRAV EVLLFFKQML INLKNSPFRT  300
RRTSINPVSN GAQHLFLQML PSFDQLFDAL SLNSELDASG RVDIYLAADP VRTSIALPVL  360
FHALDDVIHN VNMCNNFNKN SLSWPLQKLN RIYSGLVLAS GEELSFGIVT SAFDGTRMSK  420
WEEPNGARGE GCLSHQEGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17520.1	3e-30	MYB_related family protein