PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115341.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 302aa    MW: 35011.5 Da    PI: 7.867
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.31.1e-51251532128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                      pGfrFhPtdeelv +yL++kve++++++ e ik+vdiyk++PwdLpk+ + ++kewyfF+kr +ky+++ r+nr+t sg+Wkatg d++++s+ 
  XP_028115341.1  25 LPGFRFHPTDEELVGFYLRRKVEKRPISI-ELIKQVDIYKFDPWDLPKASNVGDKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSNg 118
                     59***************************.89***************98889*****************************************97 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++e +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_028115341.1 119 geGRECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 153
                     666666***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEVEKMSINM NCASKHDDDD DDVQLPGFRF HPTDEELVGF YLRRKVEKRP ISIELIKQVD  60
IYKFDPWDLP KASNVGDKEW YFFCKRGRKY RNSIRPNRVT GSGFWKATGI DRPIYSNGGE  120
GRECIGLKKS LVYYRGSAGK GTKTDWMMHE FRLPAEHDDK STKHIDVKNI AQEAEVWTLC  180
RILKRNVSYR KCIPDWRELS AKRNPVDASS KTCSIDESDS HEGFNIDFRA PVIRQNEKKL  240
FASHLGETNQ RMVGQLSSIS HQTPTTGTYS SFYSHDVNEF IKFGDWDELR SVVEFSVDPF  300
PM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-95NAC family protein