PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115519.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 319aa    MW: 36810.6 Da    PI: 7.2505
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.71.1e-53101391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL++  ++ +  ++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk++
  XP_028115519.1  10 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKEkcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATIAGFWKATGRDKAI 103
                     69****************************.9***************952444443456************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + ++++ +g++ktLvfy+grap+g+ktdW+mheyrl
  XP_028115519.1 104 HLNNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 139
                     **********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MMPENGQLPV PPGFRFHPTD EELLYYYLRK KVSYEAIDLD VIREVDLNKL EPWDLKEKCR  60
IGSGPQNEWY FFSHKDKKYP TGTRTNRATI AGFWKATGRD KAIHLNNSKR IGMRKTLVFY  120
TGRAPHGQKT DWIMHEYRLD DDNTQVQLQE DGWVVCRVFR KKGHNNRGFQ PEIVEEDDQH  180
HFAHMKASAS GSPPLDLKQN LQALYDQCNF DGSMHLPPLL SPELATHPSF LSPMSFNTTD  240
IECSHSLLRL TSGGCGVMQQ ERFNGDWSFL DKLLASHQNL DQSKCHHPPS QALDHVGLSA  300
QRFPFQYLGC ETDILKFFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-121NAC family protein