PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115549.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 204aa    MW: 22055.6 Da    PI: 11.2708
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.9e-0842771247
                     HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++ +  ++G+g+W++I+r    +Rt+ q+ s+ qky
   XP_028115549.1 42 FLIGLDKYGKGDWRSISRNYVVTRTPTQVASHAQKY 77
                     5667789****************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MWKPINKIKI KIKKNNLWQR IEGDHLGIVV FGPFRLVMKR LFLIGLDKYG KGDWRSISRN  60
YVVTRTPTQV ASHAQKYFIR LNSMNKDRRR SSIHDITSVN NGDVSVPQGP ITGQTNCSAT  120
GTSGKSNKPP SQTPAAPSGV GVYGAPTIGQ PIGPLVSAVG TPVNLPPGHM AYGVRAPVPG  180
QVVPGAPMNM GPMTYPMPHT SAHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-58MYB family protein