PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115677.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 422aa MW: 48984.8 Da PI: 6.88

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.6	3.2e-26	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r++ +k+k n+++++r +vC+keg+r+ +k++ ++++raetrtgC+a+l vk+++ +gk++vt+++++HnH+l+ XP_028115677.1 25 DFYNTYGGTLGFSIRRDFCRKNKINNQFICRLLVCNKEGFRKGDKRD-PLSKNPRAETRTGCEARLYVKLDEgTGKYVVTDFKEKHNHDLV 114 6*****************************************999.999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MEPENDCAWK PKQGMTFDSE QCVYDFYNTY GGTLGFSIRR DFCRKNKINN QFICRLLVCN 60 KEGFRKGDKR DPLSKNPRAE TRTGCEARLY VKLDEGTGKY VVTDFKEKHN HDLVSPECAY 120 MLPSQRKIST TQAIELDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDL NSWVGKLLDN 180 EEQITNMFWA DAQMIMDYAQ FGDVVTFDTT YKLNKEHRPF ASFVGFNHHR ETVIFGAALL 240 YDETAESFVW LFQNFLEAMS GKAPKTLFTD QDAAMAKAIP IVMPDTSHCL CTWHLMQNAL 300 KHVNCLFQDN GVKGVLNKFF FDIEDTNQWK LEWAEMLDKY DAHEKHLLKL TFAVKEKWGW 360 PYVRSTWAAG MSTTQLSESF NAFLKDYIRS DFNLNEFFMH FERVLYKKRY KELEAGYALC 420 QR

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MEPENDCAWK PKQGMTFDSE QCVYDFYNTY GGTLGFSIRR DFCRKNKINN QFICRLLVCN  60
KEGFRKGDKR DPLSKNPRAE TRTGCEARLY VKLDEGTGKY VVTDFKEKHN HDLVSPECAY  120
MLPSQRKIST TQAIELDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDL NSWVGKLLDN  180
EEQITNMFWA DAQMIMDYAQ FGDVVTFDTT YKLNKEHRPF ASFVGFNHHR ETVIFGAALL  240
YDETAESFVW LFQNFLEAMS GKAPKTLFTD QDAAMAKAIP IVMPDTSHCL CTWHLMQNAL  300
KHVNCLFQDN GVKGVLNKFF FDIEDTNQWK LEWAEMLDKY DAHEKHLLKL TFAVKEKWGW  360
PYVRSTWAAG MSTTQLSESF NAFLKDYIRS DFNLNEFFMH FERVLYKKRY KELEAGYALC  420
QR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-80	FAR1 family protein