PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115880.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 534aa MW: 62226.9 Da PI: 6.9628

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.4	4.8e-23	31	120	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ +vGFs+rks+ +k+k+++e t+rtfvC+keg+ +k++ + +r+e r+gC a+l +k+++ gk++ ++++++HnHel+ XP_028115880.1 31 EFYNNYGGKVGFSIRKSYAHKNKQTKELTSRTFVCYKEGSWGIDKRD-PLVKFPRQEVRCGCGARLSIKLDRnLGKYVAIDFVEHHNHELV 120 6****************************************9999.88999**************989*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MEENNVVEEL GSCGWKPKLG MPFDFEQAAY EFYNNYGGKV GFSIRKSYAH KNKQTKELTS 60 RTFVCYKEGS WGIDKRDPLV KFPRQEVRCG CGARLSIKLD RNLGKYVAID FVEHHNHELV 120 RQECIHMLPS QRKISTTQAI DVELASESGI PLRSAYELLG RESGGRASLG FTKLDQKNYL 180 RSKRQKDLEY GEAGSVLQYF RKKTVENPSI CYAIQLDCQE QITNIFWADA QMIMDYVQFG 240 DVVTFDTTYK LNNEHRPFGT FVGFNHHRET VIFGVALMYD ETAESFTWLF QIFLEHLMQN 300 AVKHVSSLFG DVGVKGVFSK FMHEIDDEEE FRIQWDQMLD RYDAHNNHWF KQTFGVKDKW 360 GWPYIMNSWA AGMSTTQLSE SFNACLKDYI NCDHNLMEFF THFERVLHDK RYKELEAEYN 420 LSQKLPRVSI PTLMLKQMAN IYTKTIFEEF QNEYVQSIEA SIVDTRNDGE STIFTIRTMV 480 DGKKDKNIIM DTRGCLSCSC KKFEVKGIVC RHCLKVLRDI FDAKDLPAQY ILKR

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MEENNVVEEL GSCGWKPKLG MPFDFEQAAY EFYNNYGGKV GFSIRKSYAH KNKQTKELTS  60
RTFVCYKEGS WGIDKRDPLV KFPRQEVRCG CGARLSIKLD RNLGKYVAID FVEHHNHELV  120
RQECIHMLPS QRKISTTQAI DVELASESGI PLRSAYELLG RESGGRASLG FTKLDQKNYL  180
RSKRQKDLEY GEAGSVLQYF RKKTVENPSI CYAIQLDCQE QITNIFWADA QMIMDYVQFG  240
DVVTFDTTYK LNNEHRPFGT FVGFNHHRET VIFGVALMYD ETAESFTWLF QIFLEHLMQN  300
AVKHVSSLFG DVGVKGVFSK FMHEIDDEEE FRIQWDQMLD RYDAHNNHWF KQTFGVKDKW  360
GWPYIMNSWA AGMSTTQLSE SFNACLKDYI NCDHNLMEFF THFERVLHDK RYKELEAEYN  420
LSQKLPRVSI PTLMLKQMAN IYTKTIFEEF QNEYVQSIEA SIVDTRNDGE STIFTIRTMV  480
DGKKDKNIIM DTRGCLSCSC KKFEVKGIVC RHCLKVLRDI FDAKDLPAQY ILKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-100	FAR1 family protein