PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115886.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 147aa    MW: 16820.6 Da    PI: 5.0706
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.51.9e-1766138288
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                      Y++YA++vGFs+ + + +++k +g i++ +f Cs+e +++++ ++              C+a+l++++++++ w+vtk++++HnH+
  XP_028115886.1  66 LYDTYARHVGFSTNVGQYSRNKLDGPIITWDFACSREIFKRKNVES--------------CNAMLRIERKDQDSWVVTKFVEDHNHS 138
                     6***************************************998877..............**************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MDVEVVEVDG GKRENNGRAN ISTNTGEKLG RAGISFDREA LNQDDDEYTK PYVGMEFESE  60
EAAKTLYDTY ARHVGFSTNV GQYSRNKLDG PIITWDFACS REIFKRKNVE SCNAMLRIER  120
KDQDSWVVTK FVEDHNHSTS ISKVHYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.13e-22FAR1 family protein