PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028116032.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 668aa MW: 77343.4 Da PI: 8.6842

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028116032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.4	3.6e-21	60	143	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Y YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++ +w+v ++ leHnH l XP_028116032.1 60 NYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRMKEVN-----RIRKETRTGCPAMIRMRLVDSRRWRVLEVTLEHNHML 143 5899************************************99888.....999******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MEEASLSNGQ TPLDQSSEMI QERDGERTEL DGQNGVPQGR KEFVAPAVGM EFESYDDAYN 60 YYICYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RMKEVNRIRK ETRTGCPAMI 120 RMRLVDSRRW RVLEVTLEHN HMLGSKNHKS IKKINTETKR KLQSNSDAEV QTIKLYRALV 180 IDAGGNNGNS NSNAREMRNF SDHPNQLNLR KGDTQAIYNY LCRMQLTNPN FFYLMDLNDE 240 VLVKNVFWAD ARSRAASGYF SDVIFFDNTY LSNKYEIPLV AFVGINHHGQ SVSLGCGLLA 300 GETTESYVWL LKAWLLCMSG CSPQTIITNR CKFLQSAIAE VFPKSHHRFA LSHIMKKVPE 360 KLGGLRNYDA IRKALTKAVY EALKPFDFEA AWGFMLQHFG VSDHLWLQSL YEDRTRWAPV 420 YLKETFFGGM AAVRPGETLI PFFDRYVHKQ TPLKEFLDKY ELALQKKHKE EALADMESRN 480 SSPTLKTRCP FELQLSKVYT REIFKKFQFE VEEMYSCFST TQLHIDGPII IFLVKERVSG 540 EGNKREIRAY EVLYNRVASE IRCICSCFNF NGYLCRHALS VLNFNGVEEI PSKYVLSRWK 600 KDYKRLYIPD YGSSNVDATE RVQWFSQLYR SALQVMQEGV ISLDHYKVAL LALEESLIRV 660 HDAEEKHE

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MEEASLSNGQ TPLDQSSEMI QERDGERTEL DGQNGVPQGR KEFVAPAVGM EFESYDDAYN  60
YYICYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RMKEVNRIRK ETRTGCPAMI  120
RMRLVDSRRW RVLEVTLEHN HMLGSKNHKS IKKINTETKR KLQSNSDAEV QTIKLYRALV  180
IDAGGNNGNS NSNAREMRNF SDHPNQLNLR KGDTQAIYNY LCRMQLTNPN FFYLMDLNDE  240
VLVKNVFWAD ARSRAASGYF SDVIFFDNTY LSNKYEIPLV AFVGINHHGQ SVSLGCGLLA  300
GETTESYVWL LKAWLLCMSG CSPQTIITNR CKFLQSAIAE VFPKSHHRFA LSHIMKKVPE  360
KLGGLRNYDA IRKALTKAVY EALKPFDFEA AWGFMLQHFG VSDHLWLQSL YEDRTRWAPV  420
YLKETFFGGM AAVRPGETLI PFFDRYVHKQ TPLKEFLDKY ELALQKKHKE EALADMESRN  480
SSPTLKTRCP FELQLSKVYT REIFKKFQFE VEEMYSCFST TQLHIDGPII IFLVKERVSG  540
EGNKREIRAY EVLYNRVASE IRCICSCFNF NGYLCRHALS VLNFNGVEEI PSKYVLSRWK  600
KDYKRLYIPD YGSSNVDATE RVQWFSQLYR SALQVMQEGV ISLDHYKVAL LALEESLIRV  660
HDAEEKHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein