PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028116456.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 543aa MW: 62574 Da PI: 10.028

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028116456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23	2.5e-07	20	102	8	87
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 ++ GF +++++s + ++ + + C ++gk +++kk +++ +++ +++++C l+v k k ++kw ++ + HnH XP_028116456.1 20 RTNGFVIVIRTSDYG-GGRKRQRIYLACERSGKYRSRKKLkddSKDLLKQTGTKKCKCPFDLNVYKLKtNDKWILNIVCGLHNH 102 567999999999988.44446778899****999999833333334588899999999999987777************* PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MKFVFDIKDE LLIWVRDIGR TNGFVIVIRT SDYGGGRKRQ RIYLACERSG KYRSRKKLKD 60 DSKDLLKQTG TKKCKCPFDL NVYKLKTNDK WILNIVCGLH NHLATEHLQG HSYTGRLSAN 120 EKSLLVDMSK SLVRPKEIHI TLKQRDALNM STMKTVYNVR HRYRVLQEAG RSQMQQLLGE 180 LVKHKYIERH RCEEGSMTVT DLFWAYLVSL DLLRTFPRAL IMDCTYKTNR YQIPLLEIVG 240 VTLTHMTFSV AISYLQIEVE SAHARLKRQL GSSQTTFEIS FEKIHCLLEL QHIQVKASFE 300 KKSERANLVG VDVAACGCVL RHTHGLSCAH EIADYMRQGH SIPLSNIHVH WTRLTICVHN 360 LKVEKLELSC IVELEMILKR FNESAIATQL GMLKKLREIA NPASTFVIKP VVKPNPHRGH 420 KKIDTSCRRN LCAFELVDDG HDSQSTLAYS QSKKKRALKV FDKKQKVKTK TYRKRTSLPS 480 AYAGDFLPML IPFIKLMKDV DGEENCGFRA IAGLLGLGEN DWVQVRRDLL LELNNYRDEY 540 VIR

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MKFVFDIKDE LLIWVRDIGR TNGFVIVIRT SDYGGGRKRQ RIYLACERSG KYRSRKKLKD  60
DSKDLLKQTG TKKCKCPFDL NVYKLKTNDK WILNIVCGLH NHLATEHLQG HSYTGRLSAN  120
EKSLLVDMSK SLVRPKEIHI TLKQRDALNM STMKTVYNVR HRYRVLQEAG RSQMQQLLGE  180
LVKHKYIERH RCEEGSMTVT DLFWAYLVSL DLLRTFPRAL IMDCTYKTNR YQIPLLEIVG  240
VTLTHMTFSV AISYLQIEVE SAHARLKRQL GSSQTTFEIS FEKIHCLLEL QHIQVKASFE  300
KKSERANLVG VDVAACGCVL RHTHGLSCAH EIADYMRQGH SIPLSNIHVH WTRLTICVHN  360
LKVEKLELSC IVELEMILKR FNESAIATQL GMLKKLREIA NPASTFVIKP VVKPNPHRGH  420
KKIDTSCRRN LCAFELVDDG HDSQSTLAYS QSKKKRALKV FDKKQKVKTK TYRKRTSLPS  480
AYAGDFLPML IPFIKLMKDV DGEENCGFRA IAGLLGLGEN DWVQVRRDLL LELNNYRDEY  540
VIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	59	RKRQRIYLACERSGKYRSRKKLK