PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028116573.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 542aa MW: 63613.1 Da PI: 7.8346

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028116573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.4	3.7e-26	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ +k+k +++ ++r +vC+keg+r+ +k++ ++++raetrtgC+a+l +k+++ +gk++vt+++++HnH+l+ XP_028116573.1 25 DFYNTYGGRMGFSIRMDYCRKNKFTNQLICRLLVCNKEGFRKVDKRD-PLAKNPRAETRTGCEARLYIKLDEsTGKFVVTDFKEKHNHDLV 114 6*****************************************999.999****************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MELENDCAWK PKQGMTFDSE QCAYDFYNTY GGRMGFSIRM DYCRKNKFTN QLICRLLVCN 60 KEGFRKVDKR DPLAKNPRAE TRTGCEARLY IKLDESTGKF VVTDFKEKHN HDLVSSECAH 120 MLPLQRKIST TQAVELELAA QFGLRLGQCF ELMGREAGGR QCLGYTKLDQ KNYLKNKRQQ 180 SLAYGEVGNV LQYFKEKSLQ NPSFFYVFQL DNEEQIINML WVDAQMIMDY TQFSDVVTFD 240 TTYKLNKEHR PFASFVGFNH HRETVIFGVA LLYDETAESF VWLFESFLEA MSRKAPKTLF 300 TDQDAAMAKA IPIVMPDTSH RLCTWHLMQN ALKHVNCLFQ DKGVKGILNK FFFDIEDANQ 360 WKLEWAEMLD KYDVHENHWL KLTFAVKENW AWPYVRSTWT EGMSTIQLSE SFNVFLKDYI 420 RSDFNLNEFF IHFERVLYDK RYKELKAGYA LCQRLPKVKA TIRMLIQMGN VYTKKIFEEF 480 QNEYFRSIES DIEAIEYGEA STIYTVIDVG NKHVRKVKME RMALWVVIVQ SLKGKASCVV 540 TH

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MELENDCAWK PKQGMTFDSE QCAYDFYNTY GGRMGFSIRM DYCRKNKFTN QLICRLLVCN  60
KEGFRKVDKR DPLAKNPRAE TRTGCEARLY IKLDESTGKF VVTDFKEKHN HDLVSSECAH  120
MLPLQRKIST TQAVELELAA QFGLRLGQCF ELMGREAGGR QCLGYTKLDQ KNYLKNKRQQ  180
SLAYGEVGNV LQYFKEKSLQ NPSFFYVFQL DNEEQIINML WVDAQMIMDY TQFSDVVTFD  240
TTYKLNKEHR PFASFVGFNH HRETVIFGVA LLYDETAESF VWLFESFLEA MSRKAPKTLF  300
TDQDAAMAKA IPIVMPDTSH RLCTWHLMQN ALKHVNCLFQ DKGVKGILNK FFFDIEDANQ  360
WKLEWAEMLD KYDVHENHWL KLTFAVKENW AWPYVRSTWT EGMSTIQLSE SFNVFLKDYI  420
RSDFNLNEFF IHFERVLYDK RYKELKAGYA LCQRLPKVKA TIRMLIQMGN VYTKKIFEEF  480
QNEYFRSIES DIEAIEYGEA STIYTVIDVG NKHVRKVKME RMALWVVIVQ SLKGKASCVV  540
TH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-103	FAR1 family protein