PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116638.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 186aa    MW: 20650.7 Da    PI: 9.9316
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.71e-052042123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ykC+ C++ F++   L  H++ H
  XP_028116638.1 20 YKCNWCPRKFTTCQGLAGHMNAH 42
                    9*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEETAPESSA GLRIVEKYVY KCNWCPRKFT TCQGLAGHMN AHRSDVRYVK GCSHVRIPYY  60
RQPSATVPST FPVTFRPPSV APRLDYMPAP MPATIFTHAP ASVAVHPSFA RLGHAPLPTI  120
PPRVRVVRPR LVNRNHGFVR AFQGLERSSE TTMTDPKAGV AAQRGEEEEV TSKETVVVDL  180
ELTLGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.12e-08C2H2 family protein