PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116750.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 92aa    MW: 10965.5 Da    PI: 9.3542
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-073170445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++++E++l+ +  k+ G++ W++Ia +++ gR + ++  +w+
   XP_028116750.1 31 MSEQEEDLIHRMYKLVGNR-WALIAGRIP-GRKAGEIERFWL 70
                     799****************.*********.*********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MDKRPRKQLK TTHNSCCSDE VSSIEWEFIN MSEQEEDLIH RMYKLVGNRW ALIAGRIPGR  60
KAGEIERFWL MKHGEGFASR RKELLFFNNT HQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.13e-37MYB_related family protein