PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116783.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 257aa    MW: 28049.7 Da    PI: 8.9345
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-18105155255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr ++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a++ a+ +++g
  XP_028116783.1 105 QYRGVRTRP-WGKYAAEIRDPAKNG--ARVWLGTYETAEDAAVAYDIAAYRMRG 155
                     69****999.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MYAEGDFNAN FALLCSIHRD LQGEFEAPAM NSGNNPVEYC WVNNLFPCLA QNSGDLPLKE  60
NHSEDIGRLP TPAVASTTAA AIEMSNFSKS VAPPVTAAVE SKGRQYRGVR TRPWGKYAAE  120
IRDPAKNGAR VWLGTYETAE DAAVAYDIAA YRMRGSRALL NFPLRINSGE PEPVRVTGKR  180
SSADRSSSSP ASSLPSSENG CSGKRRRKKV VAKEEPVVVV PKLEEEGGER RLEIREVKKI  240
KKMDKIGCAE PNQIGPI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204245KRRRKKVVAKEEPVVVVPKLEEEGGERRLEIREVKKIKKMDK
2205246KRRRKKVVAKEEPVVVVPKLEEEGGERRLEIREVKKIKKMDK
3206247KRRRKKVVAKEEPVVVVPKLEEEGGERRLEIREVKKIKKMDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-43ERF family protein