PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116789.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GeBP
Protein Properties Length: 162aa    MW: 18237.1 Da    PI: 10.2777
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116789.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57388.11.1e-2775162395
          DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     fqrlws +Deiv+LqG+id+ a++g++ps+ ++af+ f+k+si+++ +k+ql++K+r+LK+K+k++  k      +  s++h+q+ ++ls+ki
  XP_028116789.1  75 FQRLWSVDDEIVILQGIIDYIATKGADPSAYMNAFFLFIKDSIHVNDTKTQLSDKVRKLKNKYKTNAIK-----AKLPSNPHNQQLYDLSQKI 162
                     9****************************************************************9999.....5566899*********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MLVTRSHFAV RNPVLNKQPI SNPTLKCPVV ESKDQELKRA KAVKVKVNAD GVEDTLNKTT  60
TATTCTTSVS KNVFFQRLWS VDDEIVILQG IIDYIATKGA DPSAYMNAFF LFIKDSIHVN  120
DTKTQLSDKV RKLKNKYKTN AIKAKLPSNP HNQQLYDLSQ KI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-21GeBP family protein