PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028116790.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GeBP

Protein Properties

Length: 188aa MW: 21812.9 Da PI: 9.7648

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028116790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	30.8	7.9e-10	27	54	3	32
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd 32 fqrlws +Deiv+LqG++d+++++++ ++ XP_028116790.1 27 FQRLWSVDDEIVILQGIMDYTTTKDS--TQ 54 9*******************988874..33 PP
2	DUF573	73.2	4.8e-23	70	146	16	97
DUF573 16 LqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 L+G+id++a++g++ps d++af+ f+k+ i+++ +k+ql+eK+r+LK+K+k++ +k + ++hdq+ ++ls+kiW+ XP_028116790.1 70 LKGIIDYTATKGVDPSTDMNAFFLFIKDPIHVHDTKTQLSEKVRKLKNKYKTNATK-----AKFPFNPHDQQLYDLSQKIWD 146 9****************************************************9.....444568************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MRMRLRHVEQ DSIATTCTTF ASKNEFFQRL WSVDDEIVIL QGIMDYTTTK DSTQRWNSAS 60 QEDCKCGQRL KGIIDYTATK GVDPSTDMNA FFLFIKDPIH VHDTKTQLSE KVRKLKNKYK 120 TNATKAKFPF NPHDQQLYDL SQKIWDFQTN AAKLDTTNNN KDMVHGKQIL KKGALSKMAE 180 IERELKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	6e-13	GeBP family protein