PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116819.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 250aa    MW: 27561.8 Da    PI: 6.0874
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-18104154255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd  +ng  +r++lg++ tae+Aa a++ a+ k++g
  XP_028116819.1 104 RYRGVRRRP-WGKYAAEIRDRAKNG--ARVWLGTYETAEDAAVAYDIAAYKMRG 154
                     59*******.**********66665..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MCAEDDFDAS FALMKSISRH LLGEFEAPSI NSGDNPTDYC WVNDLFPCII XSKEELPLKE  60
NQSEDIVSLP TPAVATTATV TEISNFSESV ALPETTAVES KGWRYRGVRR RPWGKYAAEI  120
RDRAKNGARV WLGTYETAED AAVAYDIAAY KMRGSRALLN FPLRINSGEP EPVRVTSKRS  180
SPDQSSSSSS ENGCSGKRRR KKVVAKVEPV VVVPPPKLKE VVVGGRESGL ETIQIQFGPN  240
YSTWSMASEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-39ERF family protein