PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028116968.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 273aa MW: 31741 Da PI: 9.6699

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028116968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.6	1.2e-49	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l pGfrFhPtdeel+ +yL++kve+k++++ e ik++di+k++PwdLpk+ ++kewyf+s r++ky+++ r+nr+t+sg+Wkatg d++++s+ XP_028116968.1 16 LLPGFRFHPTDEELLGFYLRRKVENKPNTI-ELIKHIDICKYDPWDLPKAGIVGDKEWYFYSIRERKYRNSIRPNRVTASGFWKATGVDRPIYST 109 579**********************999.89***********7555689***********************************8 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e +glkk Lvfy+gra kg+kt+W+mhe+rl XP_028116968.1 110 snPHECIGLKKALVFYRGRAGKGTKTEWMMHEFRL 144 555566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MSGLCNNSEE EDEEVLLPGF RFHPTDEELL GFYLRRKVEN KPNTIELIKH IDICKYDPWD 60 LPKAGIVGDK EWYFYSIRER KYRNSIRPNR VTASGFWKAT GVDRPIYSTS NPHECIGLKK 120 ALVFYRGRAG KGTKTEWMMH EFRLPTSNNT NLSKARNITK ELEVWTICRV FTRSVSYRKY 180 ESDWRETPLK KSSMKCSIPK PCTSSKLDVS YKSRSIENSK EKQRNNQLVA GHLNFSNPNG 240 NSISKDGNWD ELQPILDFAL HPHMVVGKDG RWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	2e-80	NAC family protein