PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117147.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 305aa    MW: 35368.6 Da    PI: 8.4611
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.46.3e-1916106199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv       +s+ l++p  f+++ +g+   +   +l+d+ g+ W v++  +   +++++++GW++Fv++n L+ g f+vF+++g+s f  +vk
  XP_028117147.1  16 FFKVY--LPDQSSQSLRVPPAFVKQLNGP--IPNNAILKDLGGKFWHVEI--EEAENGIYFKNGWQRFVNDNSLEFGNFLVFRYKGHSLF--HVK 102
                     77777..445555669*******999888..6678***************..*********************************99999..*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr+
  XP_028117147.1 103 IFRE 106
                     **97 PP
2B368.78e-22206302198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv + + + + g++ +p +f+++++++ ++s+tl + d+  +sW vkli r k  ++ l++GW +F+++n Lk++D++vF+l++r++f l+v+
  XP_028117147.1 206 FFKVVMAPAYINGGLMNIPATFLKSYMEEDRQSVTLLVSDKPDKSWPVKLI-RFKETTCKLSQGWLKFCRENTLKTRDVCVFELVERNDFVLKVS 299
                     99************************99999*******************5.55555688******************************99999 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_028117147.1 300 ILR 302
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MAKRHCGRKA SYFYEFFKVY LPDQSSQSLR VPPAFVKQLN GPIPNNAILK DLGGKFWHVE  60
IEEAENGIYF KNGWQRFVND NSLEFGNFLV FRYKGHSLFH VKIFRENGCM KEEALTFEKT  120
AVSVEIEEES EEEDTCSEPI HNCKRKYSKI GRKRSENYEG KSERLECEAR SEGITKGTLR  180
LKVPRAIQGD DRALETASKF VSEFPFFKVV MAPAYINGGL MNIPATFLKS YMEEDRQSVT  240
LLVSDKPDKS WPVKLIRFKE TTCKLSQGWL KFCRENTLKT RDVCVFELVE RNDFVLKVSI  300
LRCLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-33B3 family protein