PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028117437.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 392aa MW: 43288.8 Da PI: 7.8798

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028117437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.3e-32	224	279	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_028117437.1 224 KARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 279 68****************************************************97 PP
2	Myb_DNA-binding	42.8	1.2e-13	226	277	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ XP_028117437.1 226 RRCWSPELHRRFLHALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 277 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MISDSHNHNQ HNNHAEKMQK CQEYIEALQE EHRKIQVFQR ELPLCLELVA QAIEACKQQL 60 SGTSTECFHG QSECSEQTST EGPVLEEFIP IKKNSFCDCE DNNDDDDNEQ QSQKSKINNN 120 DDNRSIDKLS KKSDWLRSVQ LWNHTPDPPT KQESPRKVSI MEVKRNGGGA FHPFKKENNV 180 GTILTKDPSV PAAAASSTAE NGGGDGGASG GGKKEEKEGQ SQRKARRCWS PELHRRFLHA 240 LQQLGGSHVA TPKQIRELMK VDGLTNDEVK SHLQKYRLHS RRSPTPSIHH SNNQQAPQFV 300 VVGGIWVPPP EYTAAVETAA ASKEASGVSS PNRIYAPIAA PPQKQKQQQQ QQQKQSKQLH 360 SDGRASHSEG RGHSSSPASS SSTHTTTASL AL

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MISDSHNHNQ HNNHAEKMQK CQEYIEALQE EHRKIQVFQR ELPLCLELVA QAIEACKQQL  60
SGTSTECFHG QSECSEQTST EGPVLEEFIP IKKNSFCDCE DNNDDDDNEQ QSQKSKINNN  120
DDNRSIDKLS KKSDWLRSVQ LWNHTPDPPT KQESPRKVSI MEVKRNGGGA FHPFKKENNV  180
GTILTKDPSV PAAAASSTAE NGGGDGGASG GGKKEEKEGQ SQRKARRCWS PELHRRFLHA  240
LQQLGGSHVA TPKQIRELMK VDGLTNDEVK SHLQKYRLHS RRSPTPSIHH SNNQQAPQFV  300
VVGGIWVPPP EYTAAVETAA ASKEASGVSS PNRIYAPIAA PPQKQKQQQQ QQQKQSKQLH  360
SDGRASHSEG RGHSSSPASS SSTHTTTASL AL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-95	G2-like family protein