PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028117445.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ZF-HD

Protein Properties

Length: 156aa MW: 17313.5 Da PI: 7.3168

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028117445.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	68.5	1.1e-21	16	67	3	59
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 vrY+eC kNh a+ G a+DGC+Efm+ ++ l C AC+CHRnFH+++v+e XP_028117445.1 16 IVRYEECCKNHGARAGKSAIDGCKEFMAM-----LTNPLYCDACECHRNFHKKKVVE 67 689***********************9.....4579*************9865 PP
2	ZF-HD_dimer	64.3	2.4e-20	75	134	3	58
ZF-HD_dimer 3 kvrYkeClkNhAaslGghav.DGCgEfmpsegee.gt..aaalkCaACgCHRnFHRreve 58 ++ Y++C kNhA+++ ++ DGC Efmpseg + ++ a l CaACgCHRnFH+r+v XP_028117445.1 75 EAIYENCCKNHAIRVAKFSYeDGCLEFMPSEGGDkAEdsRAKLICAACGCHRNFHKRKVG 134 678**********998755*****98774223367899**********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MSNKEGSSSA SMANKIVRYE ECCKNHGARA GKSAIDGCKE FMAMLTNPLY CDACECHRNF 60 HKKKVVEDGE ASDSEAIYEN CCKNHAIRVA KFSYEDGCLE FMPSEGGDKA EDSRAKLICA 120 ACGCHRNFHK RKVGEKVVPR RSPPVYYGGG YDSDDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18835.1	3e-15	ZF-HD family protein