PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117499.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 261aa    MW: 28457.3 Da    PI: 8.1847
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117499.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.52.5e-20135169135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_028117499.1 135 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 169
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MYRCSSSHCN MVGSCTCGGV FHSQSNSFSM LFNHHRPFDE AEMYSFTPSS SSSCSSVDCT  60
LSLGTPSTRL TNNDETEKRV HHDRRSGSRM SNFCWDILQQ SKHTASPPPT HKAGRGSNTN  120
NSGGGGGDPL LARRCANCDT TSTPLWRNGP RGPKSLCNAC GIRFKKEERR ASAATVSTTT  180
YGGAGSGGGG VMEPPQHMMN NSWVQQHSHS QKMPCFSPAT TTTGNEFSFI DDDRDSDTGI  240
PFLSWRLNVT DRPSLVHDFT R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-48GATA family protein