PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117838.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 228aa    MW: 24418.2 Da    PI: 8.5816
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.0004387109123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k F +   L  H  +H
  XP_028117838.1  87 YKCSVCDKAFASYQALGGHKASH 109
                     9***********99998888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MALEALNSPS AATPTFHHEN ESLRYLEPWN KGKRSKRPRM ENPPTEEEYL ALCLIMLARG  60
GPTSSASQRR HSTPPPSSSS SESKLVYKCS VCDKAFASYQ ALGGHKASHR KLAGSDDQST  120
STSTGTTTVT SGGRTHECSI CHKCFPTGQA LGGHKRCHYD GGSSGVTSSE GVGSTNSHRG  180
FDLNLPAALP QFCPRFAGEE EVESPHPAKK PRFLLSAKSQ VSLSISLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-50C2H2 family protein