PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118118.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YC
Protein Properties Length: 118aa    MW: 12861.9 Da    PI: 9.7118
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC107.11.1e-33221031898
           NF-YC  18 nhelPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                      h+lPlarikki+k + +dvkmis eaP+++skacelfi el+ rsw+ a ++k+rtl+k d+a+av  tdifdfl++ v  
  XP_028118118.1  22 THSLPLARIKKIMKkSGNDVKMISGEAPIVFSKACELFIEELAKRSWMMAIQSKKRTLQKEDVASAVIATDIFDFLLNLVSD 103
                     699**********72569**********************************************************998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MRQAGTYSGI LSGRGISGRT GTHSLPLARI KKIMKKSGND VKMISGEAPI VFSKACELFI  60
EELAKRSWMM AIQSKKRTLQ KEDVASAVIA TDIFDFLLNL VSDSANSDDN PGILDTKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.13e-32NF-YC family protein