PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028118138.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 757aa MW: 87383 Da PI: 8.1429

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028118138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.8	1.9e-23	41	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs r+++ +k++++g +++r+fv keg+re++k++ + +++r+etrt+Cka ++++ ++ +kw v+k++++HnH+l XP_028118138.1 41 EFYNEYGRIVGFSSRRDYCNKNQKDGVMISRKFVRCKEGEREKDKRH-TMIKNPRSETRTNCKAFMHISFKRdLSKWIVSKFNSNHNHPL 129 6****************************************9999.99***************999799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MEDSIMDDGG LEGCIEEMGE LAKDKSLYLG MEFLSEEAAY EFYNEYGRIV GFSSRRDYCN 60 KNQKDGVMIS RKFVRCKEGE REKDKRHTMI KNPRSETRTN CKAFMHISFK RDLSKWIVSK 120 FNSNHNHPLH LLQCTYLMSS QRKGKPGIAI ANESGICLKA SHDLISAIAG GKEFVGFTQE 180 DQKTYLCAKR QRKLQYGEVG SLLRYFQQQV AENSYFYYAI QLDVDEMITN IFWADHQMIT 240 DCGLFGDEVS FDTTFRTNKE YRPLALFSGF NHFRMTVIFG AALLYDETAE SFEWLFETFL 300 DAMSGKKPVS FFIDQDQAMA KAISQIMPEV FHGLCTFNLM QNALKHLGYL FKSGSKFSSD 360 LKACIYDYEN EHELIEAWNS LIDKYHLQEN EWMKKTWRKR EHWAHVYMKW VFTVGMRSTQ 420 LSESLNGTLR GYLKGDHNIV QFFTHFNRIV VEKRYEEISA IYDSRQKLPR MKLKKSPILI 480 QVASLYTPPI FDLFHCELDT SLCCQVKQFH ELEGEVKYVI GLYGNGEEYI VDGRVEVIGL 540 RGEKSCQEIH CTGKKFENFG ILCSHAIKAL DRMNVMKIPE RYILGRWRLD AKDCEVEEKN 600 VVVDEDDLKL LILVRYRDLC PRMVKLATQA SMHKPAYQLV DEGIKELCVK VNNMMKGVGN 660 FGTNELDVDD PNFAQVKGIK KKDVGHKGRG RLKPWHEIMN KKTKVISQPT RLSKTIGQSS 720 NTRNVQNSTS SQQQIIGQSS NITNVQNSSS SQQQGSR

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MEDSIMDDGG LEGCIEEMGE LAKDKSLYLG MEFLSEEAAY EFYNEYGRIV GFSSRRDYCN  60
KNQKDGVMIS RKFVRCKEGE REKDKRHTMI KNPRSETRTN CKAFMHISFK RDLSKWIVSK  120
FNSNHNHPLH LLQCTYLMSS QRKGKPGIAI ANESGICLKA SHDLISAIAG GKEFVGFTQE  180
DQKTYLCAKR QRKLQYGEVG SLLRYFQQQV AENSYFYYAI QLDVDEMITN IFWADHQMIT  240
DCGLFGDEVS FDTTFRTNKE YRPLALFSGF NHFRMTVIFG AALLYDETAE SFEWLFETFL  300
DAMSGKKPVS FFIDQDQAMA KAISQIMPEV FHGLCTFNLM QNALKHLGYL FKSGSKFSSD  360
LKACIYDYEN EHELIEAWNS LIDKYHLQEN EWMKKTWRKR EHWAHVYMKW VFTVGMRSTQ  420
LSESLNGTLR GYLKGDHNIV QFFTHFNRIV VEKRYEEISA IYDSRQKLPR MKLKKSPILI  480
QVASLYTPPI FDLFHCELDT SLCCQVKQFH ELEGEVKYVI GLYGNGEEYI VDGRVEVIGL  540
RGEKSCQEIH CTGKKFENFG ILCSHAIKAL DRMNVMKIPE RYILGRWRLD AKDCEVEEKN  600
VVVDEDDLKL LILVRYRDLC PRMVKLATQA SMHKPAYQLV DEGIKELCVK VNNMMKGVGN  660
FGTNELDVDD PNFAQVKGIK KKDVGHKGRG RLKPWHEIMN KKTKVISQPT RLSKTIGQSS  720
NTRNVQNSTS SQQQIIGQSS NITNVQNSSS SQQQGSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-104	FAR1 family protein