PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028118142.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

LBD

Protein Properties

Length: 195aa MW: 22391.2 Da PI: 5.9523

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028118142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	144.2	3.9e-45	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +Ca+Ck+lrr+C+kdC++apyfp+++p+kfa+vhk+FGasnv+k+l++lp ++r da+ss+vyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la XP_028118142.1 6 PCASCKMLRRRCTKDCIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQDLPVHQRADAVSSIVYEANARMRDPVYGCVGAISYLQNQVSQLQMQLA 100 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_028118142.1 101 VAQAE 105 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MGGNSPCASC KMLRRRCTKD CIFAPYFPSD DPRKFAIVHK VFGASNVSKM LQDLPVHQRA 60 DAVSSIVYEA NARMRDPVYG CVGAISYLQN QVSQLQMQLA VAQAEIFCIQ MQQELPMQTP 120 NKHEHEHEHE HEYEHEHELE LELELELVDP DDKSYFLHDN LPHHHQYLDF ASSSNVMQGS 180 LKRESLFGHH DMISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	5e-73	LBD family protein