PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118222.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 327aa    MW: 37321.1 Da    PI: 5.2887
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.7e-11161203855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er+RR r+++++  Lr l+P+      +K++Ka+i+  AveY+++Lq
  XP_028118222.1 161 SERKRRGRMKEKLYALRALVPNI-----TKMDKASIVGDAVEYLQELQ 203
                     6*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MWYHGDLYIY ATRTRSLMIN LSFETMERME TSGNQPGHVG DDFNLLSQDL FINESNFEQF  60
IDLIRGETND PIVEFCHNYD CEHISGCLDH TQFGPTPGDQ DQDPLFGCNN LSSGLNALPA  120
VDVGEEENDN DIGEEYSSAT TTTTTRLTKR KGGDRSRTLV SERKRRGRMK EKLYALRALV  180
PNITKMDKAS IVGDAVEYLQ ELQMQARKLR AEIAGLESSL TEGDRHRQGI VENRKNIQFI  240
SPNHTICKHI MQMDMIQVEE RGFYVRVECN RGQGVASSLY KAIESLTRFN VQSSNLATLS  300
ERFILTFTIK VRECEPNMNL PNLKLWM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149166KRKGGDRSRTLVSERKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-75bHLH family protein