PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028118237.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 401aa MW: 47331.2 Da PI: 8.7512

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028118237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.2	9.9e-22	11	100	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r++ +k+k +++ ++r +vC+keg+++ +k++ ++++raetr g +a+l vk+++ +gk +vt+++++HnH+l XP_028118237.1 11 DFYNTYGGRLGFSIRRDFCRKNKVTNQLICRLLVCNKEGFQKGDKRD-PLSKNPRAETRAGSEARLYVKLDEgTGKSVVTDFKEKHNHDLL 100 6*****************************************999.999*****************9*************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MTFDSEQCVY DFYNTYGGRL GFSIRRDFCR KNKVTNQLIC RLLVCNKEGF QKGDKRDPLS 60 KNPRAETRAG SEARLYVKLD EGTGKSVVTD FKEKHNHDLL DNEEQIANMF WTDAQMIMDY 120 AQFGDVVTFD TTYKLNKEHR PFVSFVGFNH HRKTVIFGAA LLYNETAESF VWLFQNFLEA 180 MLERAPKTLF TDQDAAIAKA IPIFMPDTSH RLCTWHLMQN ALKHVNCFLQ DKGVKGVLNK 240 FFFDIKDANQ WKLEWAEMPH ENHWLKLTFA VKEKWGWPYV RSTWAARMST TQLSESFNAF 300 LKDYIRPNFN LNEFFMHFER VLYEKRYKEL KAGYTLCQRL SKVKATIRML IQMRNVYTKK 360 IFEEFQNEYF RSIKSDIEAI EYSEASTIYI VVDVGNNMQG K

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MTFDSEQCVY DFYNTYGGRL GFSIRRDFCR KNKVTNQLIC RLLVCNKEGF QKGDKRDPLS  60
KNPRAETRAG SEARLYVKLD EGTGKSVVTD FKEKHNHDLL DNEEQIANMF WTDAQMIMDY  120
AQFGDVVTFD TTYKLNKEHR PFVSFVGFNH HRKTVIFGAA LLYNETAESF VWLFQNFLEA  180
MLERAPKTLF TDQDAAIAKA IPIFMPDTSH RLCTWHLMQN ALKHVNCFLQ DKGVKGVLNK  240
FFFDIKDANQ WKLEWAEMPH ENHWLKLTFA VKEKWGWPYV RSTWAARMST TQLSESFNAF  300
LKDYIRPNFN LNEFFMHFER VLYEKRYKEL KAGYTLCQRL SKVKATIRML IQMRNVYTKK  360
IFEEFQNEYF RSIKSDIEAI EYSEASTIYI VVDVGNNMQG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-53	FAR1 family protein