PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118262.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 250aa    MW: 28392.8 Da    PI: 9.9475
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.76.3e-42201421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp GfrFhPtdeelvv+yL++k+++ +l++  vi+++d+++++PwdLp     ++++ +fF+kr+kk+ +  + + +t sgyWka gkdk ++s 
  XP_028118262.1  20 LPIGFRFHPTDEELVVHYLNRKIHSFPLPA-CVIPDLDVFQTNPWDLPG---DSKEKRFFFCKRSKKNVN--KCKGITGSGYWKAMGKDKYIISP 108
                     699************************999.78***************3...356688******999765..556699****************9 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kk+Lvf +g++p+g +t+Wvmheyrl
  XP_028118262.1 109 gSNQAVGVKKSLVFCQGKRPRGLRTHWVMHEYRL 142
                     66778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MEMEMEKANM VRKGGMMMKL PIGFRFHPTD EELVVHYLNR KIHSFPLPAC VIPDLDVFQT  60
NPWDLPGDSK EKRFFFCKRS KKNVNKCKGI TGSGYWKAMG KDKYIISPGS NQAVGVKKSL  120
VFCQGKRPRG LRTHWVMHEY RLAGSQTIPN STEKFMMEME EEWVVCRIYQ KMWKSKNKGV  180
KSQVSKYGNV RKIRPSIIDT MKTEEGSDSG PPQPSSASSC SSGITEVSSK TSSDQEETSA  240
YNFSFSSLLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-54NAC family protein