PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028118350.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 978aa MW: 106251 Da PI: 5.507

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028118350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.2	2.2e-15	550	588	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+e C C++C+N+ e XP_028118350.1 550 CKRCNCKKTKCLKLYCDCFAAGIYCAEPCACQGCFNRPE 588 79**********************************876 PP
2	TCR	48.1	2.2e-15	637	675	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks C+kkYCeC++a++ Cs+ C+Ce+CkN XP_028118350.1 637 RHKRGCNCKKSMCVKKYCECYQANVGCSSGCRCEGCKNV 675 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 978 aa Download sequence
MDSPEKVKTS TSIAAATTLP SDSVAAPDST IFGYISNLSP IKPVKAAPVV PGFPSLNSPP 60 IVFTSPHLNP LCETTYLKRS QCPQLSCEEL CQQDISDNKF EIGSNELEKS KTQSSSTLIP 120 CVERECDTKG SVPDQAASPP ECIDKYLADT VEVNCENSAH SANLSLIQSD DDMPQSIKDF 180 TDSKLDDEND IRQDAEILMG AFPATPELAG QDFQGKSSFN DEPVETDAKQ GGSEMPSCEC 240 PKVESGLSVE QQCELSVAQH AGAVHEDELG CASQFLPESL QPSQGYEDCS EITGEASNKI 300 ADNIVLHDPK GQHYSGMRRR CLRFEEARGN IVENSPGSRG SSNVVTSSSL PANLADMEVF 360 ESSSLEISAT SSGRHLINLT QPIISVIPPR NNGNPRSSIS KPSGIGLHLN TIVNAKPMSC 420 GVSGSMQSAE KGYLNVQDGK LVSNMDCHQP ESTKNSSILS NVREKLPVSS EDCSHETQVS 480 VATSYLPSQY LQIVKSSTDI APLKQIEYET TLCDKRKSIS KHAHAVESSN LSSPKKKRKK 540 ASATNDGDGC KRCNCKKTKC LKLYCDCFAA GIYCAEPCAC QGCFNRPEYE DTVLDTRKQI 600 EFRNPLAFAP KIVQGLTDSS ANSIGEDGNY STPSSERHKR GCNCKKSMCV KKYCECYQAN 660 VGCSSGCRCE GCKNVYGKKE EYGMTKDVLS EGPVNERFES TFDELEMAAS RDGLLQTELC 720 NLDNFIPPTP SFQFLDHGNC APKSRFSTRR CLPSPESNLT LPKSLETSDN NHDLLLKARK 780 DIQGIDYYCQ ELDFSNAETV NELSPRYDGL SNMCDLSTLP NPPSTAMAYS ASSKISDWTT 840 ISRAQLCARS GHLSSVSSFH WRGSPITPVA QFGGTKLLGA VESDKKHHDI PEDDTPEILK 900 DTSTPLKAVK VTSPNKKRVS PPHRRLHELG SSSSAGLRSG RKFILRAVPS FPPLTPCIDS 960 KDSSSQNIND PLDCSSKK

Sequence ? help Back to Top

Protein Sequence Length: 978 aa Download sequence

MDSPEKVKTS TSIAAATTLP SDSVAAPDST IFGYISNLSP IKPVKAAPVV PGFPSLNSPP  60
IVFTSPHLNP LCETTYLKRS QCPQLSCEEL CQQDISDNKF EIGSNELEKS KTQSSSTLIP  120
CVERECDTKG SVPDQAASPP ECIDKYLADT VEVNCENSAH SANLSLIQSD DDMPQSIKDF  180
TDSKLDDEND IRQDAEILMG AFPATPELAG QDFQGKSSFN DEPVETDAKQ GGSEMPSCEC  240
PKVESGLSVE QQCELSVAQH AGAVHEDELG CASQFLPESL QPSQGYEDCS EITGEASNKI  300
ADNIVLHDPK GQHYSGMRRR CLRFEEARGN IVENSPGSRG SSNVVTSSSL PANLADMEVF  360
ESSSLEISAT SSGRHLINLT QPIISVIPPR NNGNPRSSIS KPSGIGLHLN TIVNAKPMSC  420
GVSGSMQSAE KGYLNVQDGK LVSNMDCHQP ESTKNSSILS NVREKLPVSS EDCSHETQVS  480
VATSYLPSQY LQIVKSSTDI APLKQIEYET TLCDKRKSIS KHAHAVESSN LSSPKKKRKK  540
ASATNDGDGC KRCNCKKTKC LKLYCDCFAA GIYCAEPCAC QGCFNRPEYE DTVLDTRKQI  600
EFRNPLAFAP KIVQGLTDSS ANSIGEDGNY STPSSERHKR GCNCKKSMCV KKYCECYQAN  660
VGCSSGCRCE GCKNVYGKKE EYGMTKDVLS EGPVNERFES TFDELEMAAS RDGLLQTELC  720
NLDNFIPPTP SFQFLDHGNC APKSRFSTRR CLPSPESNLT LPKSLETSDN NHDLLLKARK  780
DIQGIDYYCQ ELDFSNAETV NELSPRYDGL SNMCDLSTLP NPPSTAMAYS ASSKISDWTT  840
ISRAQLCARS GHLSSVSSFH WRGSPITPVA QFGGTKLLGA VESDKKHHDI PEDDTPEILK  900
DTSTPLKAVK VTSPNKKRVS PPHRRLHELG SSSSAGLRSG RKFILRAVPS FPPLTPCIDS  960
KDSSSQNIND PLDCSSKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	536	540	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-57	CPP family protein