PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028118353.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 952aa MW: 103460 Da PI: 5.4309

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028118353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.2	2.1e-15	524	562	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+e C C++C+N+ e XP_028118353.1 524 CKRCNCKKTKCLKLYCDCFAAGIYCAEPCACQGCFNRPE 562 79**********************************876 PP
2	TCR	48.2	2.2e-15	611	649	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks C+kkYCeC++a++ Cs+ C+Ce+CkN XP_028118353.1 611 RHKRGCNCKKSMCVKKYCECYQANVGCSSGCRCEGCKNV 649 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence
MDSPEKVKTS TSIAAATTLP SDSVAAPDST IFGYISNLSP IKPVKAAPVV PGFPSLNSPP 60 IVFTSPHLNP LCETTYLKRS QCPQLSCEEL CQQDISDNKF EIGSNELEKS KTQSSSTLIP 120 CVERECDTKG SVPDQAASPP ECIDKYLADT VEVNCENSAH SANLSLIQSD DDMPQSIKDF 180 TDSKLDDEND IRQDAEILMG AFPATPELAG QDFQGKSSFN DEPVETDAKQ GGSEMPSCEC 240 PKVESGLSVE QQCELSVAQH AGAVHEDELG CASQFLPESL QPSQGYEDCS EITGEASNKI 300 ADNIVLHDPK GQHYSGMRRR CLRFEEARGN IVENSPGSRG SSNVVTSSSL PANLADMEVF 360 ESSSLEISAT SSGRHLINLT QPIISVIPPR NNGNPRSSIS KPSGIGLHLN TIVNAKPMSC 420 GVSGSMQSAE KGYLNVQDGK LVSNMDCHQP ESTKNSSILS NVREKLPVSS EDCSHETQQI 480 EYETTLCDKR KSISKHAHAV ESSNLSSPKK KRKKASATND GDGCKRCNCK KTKCLKLYCD 540 CFAAGIYCAE PCACQGCFNR PEYEDTVLDT RKQIEFRNPL AFAPKIVQGL TDSSANSIGE 600 DGNYSTPSSE RHKRGCNCKK SMCVKKYCEC YQANVGCSSG CRCEGCKNVY GKKEEYGMTK 660 DVLSEGPVNE RFESTFDELE MAASRDGLLQ TELCNLDNFI PPTPSFQFLD HGNCAPKSRF 720 STRRCLPSPE SNLTLPKSLE TSDNNHDLLL KARKDIQGID YYCQELDFSN AETVNELSPR 780 YDGLSNMCDL STLPNPPSTA MAYSASSKIS DWTTISRAQL CARSGHLSSV SSFHWRGSPI 840 TPVAQFGGTK LLGAVESDKK HHDIPEDDTP EILKDTSTPL KAVKVTSPNK KRVSPPHRRL 900 HELGSSSSAG LRSGRKFILR AVPSFPPLTP CIDSKDSSSQ NINDPLDCSS KK

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence

MDSPEKVKTS TSIAAATTLP SDSVAAPDST IFGYISNLSP IKPVKAAPVV PGFPSLNSPP  60
IVFTSPHLNP LCETTYLKRS QCPQLSCEEL CQQDISDNKF EIGSNELEKS KTQSSSTLIP  120
CVERECDTKG SVPDQAASPP ECIDKYLADT VEVNCENSAH SANLSLIQSD DDMPQSIKDF  180
TDSKLDDEND IRQDAEILMG AFPATPELAG QDFQGKSSFN DEPVETDAKQ GGSEMPSCEC  240
PKVESGLSVE QQCELSVAQH AGAVHEDELG CASQFLPESL QPSQGYEDCS EITGEASNKI  300
ADNIVLHDPK GQHYSGMRRR CLRFEEARGN IVENSPGSRG SSNVVTSSSL PANLADMEVF  360
ESSSLEISAT SSGRHLINLT QPIISVIPPR NNGNPRSSIS KPSGIGLHLN TIVNAKPMSC  420
GVSGSMQSAE KGYLNVQDGK LVSNMDCHQP ESTKNSSILS NVREKLPVSS EDCSHETQQI  480
EYETTLCDKR KSISKHAHAV ESSNLSSPKK KRKKASATND GDGCKRCNCK KTKCLKLYCD  540
CFAAGIYCAE PCACQGCFNR PEYEDTVLDT RKQIEFRNPL AFAPKIVQGL TDSSANSIGE  600
DGNYSTPSSE RHKRGCNCKK SMCVKKYCEC YQANVGCSSG CRCEGCKNVY GKKEEYGMTK  660
DVLSEGPVNE RFESTFDELE MAASRDGLLQ TELCNLDNFI PPTPSFQFLD HGNCAPKSRF  720
STRRCLPSPE SNLTLPKSLE TSDNNHDLLL KARKDIQGID YYCQELDFSN AETVNELSPR  780
YDGLSNMCDL STLPNPPSTA MAYSASSKIS DWTTISRAQL CARSGHLSSV SSFHWRGSPI  840
TPVAQFGGTK LLGAVESDKK HHDIPEDDTP EILKDTSTPL KAVKVTSPNK KRVSPPHRRL  900
HELGSSSSAG LRSGRKFILR AVPSFPPLTP CIDSKDSSSQ NINDPLDCSS KK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	510	514	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-57	CPP family protein