PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118392.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 253aa    MW: 28770.2 Da    PI: 6.1734
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR177.32.9e-2464154191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                     +fY++Y+ +vGFs+rk++ +k+k+ +eit+rtfvC+keg+r  +k++    +++r+e r+gC a++ +k+++ +gk+   +++++HnH+l+p
  XP_028118392.1  64 DFYDTYGGNVGFSIRKAYANKNKHRKEITSRTFVCYKEGSRGIDKRD-PLVKNPRQEARCGCGARFSIKLDRiSGKYIACDFVEHHNHDLVP 154
                     6*******************************************999.9999*************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAEMEEQCDG EQRIVGNGEF DGDTMAGMRH CGDGEVIEEN NIVDDCAWKP KVGMPFDSEQ  60
AAYDFYDTYG GNVGFSIRKA YANKNKHRKE ITSRTFVCYK EGSRGIDKRD PLVKNPRQEA  120
RCGCGARFSI KLDRISGKYI ACDFVEHHNH DLVPQDCIHM LPSQRKISTT QAIEVELPSE  180
SGIPLRSTYE LFGRESGGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFRKKTMEN  240
PSFFYAVQLD CEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-40FAR1 family protein