PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118452.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 314aa    MW: 35139.3 Da    PI: 4.6979
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.8e-165393547
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++ E++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
   XP_028118452.1 53 SEYEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 93
                     6779**************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MFFCSFFVFL PSFERIVIYI GVWLIAGLLR CGKSCRLRWT NYLRPDLKRG LLSEYEEKMV  60
IDLHAQLGNR WSKIASHLPG RTDNEIKNHW NTHIKKKLRK MGIDPLTHKP LPTTPTHDHQ  120
FQQQPHDQQQ EQSLPEPVPS LSEVGQNKEI ETILFESSIT DTEAKEEGPF NSMEVNNGFS  180
TDEVPLIEPH EINLVPCVPS VPLIEPHDIN LVPCVPSSSS PSSSSTITSS SSSSSSSSSS  240
SSSSSSSSHF SSSNILEELE LPTFEWGMGF WDDDFSNALD LLISGADNWN ATVEPLPPPT  300
PTQYPTRMVL DQES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.12e-51MYB family protein